# bids2squirrel

## Overview

The tool attempts to convert BIDS format data into a squirrel package.

## Example Usage

Extract a subject, with all child objects (study, series, intervention, observation, analysis)

`squirrel bids2squirrel <inputdir> <outpackage>`  &#x20;

## Options

### --overwrite

If  --overwrite flag is set,then an existing package of the same name will be overwritten

&#x20;  &#x20;


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# Agent Instructions: Querying This Documentation

If you need additional information that is not directly available in this page, you can query the documentation dynamically by asking a question.

Perform an HTTP GET request on the current page URL with the `ask` query parameter:

```
GET https://docs.neuroinfodb.org/squirrel/getting-started/squirrel-utilities/bids2squirrel.md?ask=<question>
```

The question should be specific, self-contained, and written in natural language.
The response will contain a direct answer to the question and relevant excerpts and sources from the documentation.

Use this mechanism when the answer is not explicitly present in the current page, you need clarification or additional context, or you want to retrieve related documentation sections.
