series
JSON array
An array of series. Basic series information is stored in the main squirrel.json file. Extended information including series parameters such as DICOM tags are stored in a params.json file in the series directory.
JSON variables
* required
Variable | Type | Description |
| number | Series number. May be sequential, correspond to NiDB assigned series number, or taken from DICOM header |
| date | Date of the series, usually taken from the DICOM header |
| string | From the SeriesUID DICOM tag |
| string | Description of the series |
| string | Protocol name |
| string | Experiment name associated with this series. Experiments link to the experiments section of the squirrel package |
| number | Size of the data, in bytes |
| number | Total number of files (including files in subdirs) |
| number | Size of beh data, in bytes |
| number | Total number of beh files (including files in subdirs) |
JSON file |
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JSON object |
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Directory structure
Files associated with this section are stored in the following directory. subjectID, studyNum, seriesNum are the actual subject ID, study number, and series number. For example /data/S1234ABC/1/1.
/data/<SubjectID>/<StudyNum>/<SeriesNum>
Behavioral data is stored in
/data/<SubjectID>/<StudyNum>/<SeriesNum>/beh
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